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Table 2 Haploid Diversity by locus using PowerPlex® Y23 System

From: Frequency of Y-chromosome STRs using PowerPlex® Y23 System in Iraqi population

Haploid diversity by locus

Locus

N

Na

Ne

I

h

uh

DYS576

1032

9

3.637

1.526

0.725

0.726

DYS389 I

1032

8

1.873

0.903

0.466

0.467

DYS448

1032

7

2.207

1.086

0.547

0.547

DYS389 II

1032

8

3.266

1.396

0.694

0.694

DYS19

1032

8

2.217

1.093

0.549

0.550

DYS391

1032

6

2.321

1.020

0.569

0.570

DYS481

1032

11

6.168

1.929

0.838

0.839

DYS549

1032

6

2.699

1.174

0.629

0.630

DYS533

1032

6

2.411

1.112

0.585

0.586

DYS438

1032

5

2.390

1.067

0.582

0.582

DYS437

1032

5

1.749

0.798

0.428

0.429

DYS570

1032

10

4.533

1.713

0.779

0.780

DYS635

1032

12

3.001

1.415

0.667

0.667

DYS390

1032

6

2.684

1.220

0.627

0.628

DYS439

1032

6

2.447

1.101

0.591

0.592

DYS392

1032

9

1.494

0.783

0.331

0.331

DYS643

1032

8

3.492

1.491

0.714

0.714

DYS393

1032

6

2.275

1.015

0.560

0.561

DYS458

1032

10

5.243

1.776

0.809

0.810

DYS456

1032

8

3.290

1.364

0.696

0.697

YGATAH4

1032

6

2.243

1.053

0.554

0.555

DYS385a,b

1032

14

7.546

2.175

0.791

0.791

Mean

1032.000

7.619

2.935

1.240

0.616

0.617

Standard error (SE)

0.000

0.434

0.255

0.068

0.027

0.027

  1. Na no. of different alleles, Ne No. of effective alleles = 1/(sum pi^2), I Shannon’s information, Index = − 1 × sum (pi × Ln (pi)), h diversity = 1−sum pi^2, uh unbiased diversity = (N/(N−1)) × h. Where pi is the frequency of the ith allele for the population, and sum pi^2 is the sum of the squared population allele frequencies