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Table 2 Allele frequency of each variant identified in this study, using 151 control subjects compared with frequency from various population

From: Association between SCN5A and sudden unexplained nocturnal death syndrome in Thai decedents: a case–control study

Exon dbSNP ID This study Population Minor allele frequency
Cases Controls CDX CHS KHV JPT ExAC 1000 Genomes GO-ESP
2 rs6599230
c.87
T = 0.33
C = 0.67
T = 0.37
C = 0.63
T = 0.40
C = 0.60
T = 0.30
C = 0.70
T = 0.29
C = 0.71
T = 0.38
C = 0.62
T = 0.2263/27239 T = 0.2183/1093 T = 0.1640/2022
12 rs1805124
c.1673
T = 0.92
C = 0.08
T = 0.84
C = 0.16
T = 0.93
C = 0.07
T = 0.93
C = 0.07
T = 0.87
C = 0.13
T = 0.92
C = 0.08
C = 0.2217/26713 C = 0.2304/1154 C = 0.2463/3108
17 rs7430407
c.3183
T = 0.00
C = 1.00
NA T = 0.01
C = 0.99
T = 0.00
C = 1.00
T = 0.01
C = 0.99
T = 0.00
C = 1.00
T = 0.0872/10512 T = 0.0769/385 T = 0.1150/1471
28 rs1805126
c.5457
A = 0.37
G = 0.63
A = 0.43
G = 0.57
A = 0.39
G = 0.61
A = 0.42
G = 0.58
A = 0.35
G = 0.65
A = 0.50
G = 0.50
G = 0.3878/46827 G = 0.4924/2466 G = 0.4314/5544
28 rs376826051
c.5712
C = 0.96
T = 0.04
C = 1.00
T = 0.00
NA NA NA NA T = 0.0006/71 NA T = 8e-5
/1
3′UTR rs7429945
c.*123
T = 0.37
C = 0.63
T = 0.44
C = 0.56
T = 0.39
C = 0.61
T = 0.42
C = 0.58
T = 0.51
C = 0.49
T = 0.35
C = 0.65
NA C = 0.4944/2476 NA
3′UTR rs41310757
c.*753
G = 0.88
A = 0.12
G = 0.78
A = 0.22
G = 0.74
A = 0.26
G = 0.75
A = 0.25
G = 0.74
A = 0.26
G = 0.76
A = 0.24
NA A = 0.1144/573 NA
3′UTR rs4073796
c.*962
G = 0.46
A = 0.54
G = 0.42
A = 0.58
G = 0.39
A = 0.61
G = 0.43
A = 0.57
G = 0.35
A = 0.65
G = 0.51
A = 0.49
NA A = 0.4940/2474 NA
3′UTR rs4073797
c.*963
A = 0.46
T = 0.54
A = 0.42
T = 0.58
A = 0.40
T = 0.60
A = 0.43
T = 0.57
A = 0.35
T = 0.65
A = 0.51
T = 0.49
NA T = 0.4918/2463 NA
3′UTR rs11414422
c.*1453_*1454
C = 0.54
CT = 0.46
C = 0.44
CT = 0.56
C = 0.84
CT = 0.16
C = 0.51
CT = 0.49
C = 0.44
CT = 0.56
C = 0.65
CT = 0.35
NA T = 0.3169/1587 NA
3′UTR rs41315485
c.*1537
A = 0.92
G = 0.08
A = 0.87
G = 0.13
A = 0.89
G = 0.11
A = 0.91
G = 0.09
A = 0.91
G = 0.09
A = 0.85
G = 0.15
NA G = 0.1795/899 NA
3′UTR rs45592631
c.*2145_*2146
- = 0.00
ins = 1.00
NA - = 0.00
ins = 1.00
- = 0.00
ins = 1.00
- = 0.01
ins = 0.99
- = 0.00
ins = 1.00
NA - = 0.0068/34 NA
  1. CDX Chinese Dai in Xishuangbanna, China; CHS Southern Han Chinese, China; KHV Kinh in Ho Chi Minh City, Vietnam; JPT Japanese in Tokyo, Japan; ExAC Exome Aggregation Consortium; 1000 Genomes 1000 Genomes Project; GO-ESP NHLBI GO Exome Sequencing Project; NA not available
  2. Data presented in italics are major allele